PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G030719.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family ERF
Protein Properties Length: 234aa    MW: 25443.9 Da    PI: 5.8389
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G030719.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.17.7e-1769118155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           ++ykG+r ++ +g+Wv+eIr+p++   ++r++lg+f t+e+Aa+a++ a+++l+g
  HL.SW.v1.0.G030719.1  69 PRYKGIR-CR-SGKWVSEIREPRK---TTRIWLGTFATPEMAAAAYDVAALALKG 118
                           68****9.55.6*********843...5***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.0E-1069118IPR001471AP2/ERF domain
CDDcd000182.61E-1769128No hitNo description
Gene3DG3DSA:3.30.730.102.4E-2670127IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-1870128IPR016177DNA-binding domain
SMARTSM003805.0E-2970132IPR001471AP2/ERF domain
PROSITE profilePS5103219.55970126IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MSDQTNNNTN TPLDQTNLDL PSSSCSTTTT PPIEATQHSI SPSLHTCETL SPRPATSMAS  60
TSRSSSKHPR YKGIRCRSGK WVSEIREPRK TTRIWLGTFA TPEMAAAAYD VAALALKGGE  120
AVLNFPNSIG EYPVPASASA GDIRSAATAA AALKKAELAA LEARRQETTS FREDDNNNNQ  180
TTSFEYYHHH HHEEYMDEDA LFRMLLSPPR MSSPQSEESP GSSDGGESLW GYY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010086541.17e-58Ethylene-responsive transcription factor
SwissprotQ9CAN91e-37ERF26_ARATH; Ethylene-responsive transcription factor ERF026
TrEMBLW6FIY48e-58W6FIY4_9R
STRINGPOPTR_0003s12120.11e-54(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.13e-28ERF family protein